There are many computational problems that arise in biology or medicine. I am especially interested in geometric problems that occur for example in biomedical image analysis.
Phenotypes in Prostate Cancer - Developing Topological Descriptors for Machine
Develop mathematical and computational tools based on topological descriptors and machine learning in order to distinguish between different morphological types of prostate cancer.
| Towards Automated Quantitative Prostate Cancer Diagnosis
Develop quantitative topological descriptors that capture architectural features of prostate glands in pathology images.
| Analysis of 2D
Correctly modeling the shapes of protein spots in 2D electrophoresis gels as well as comparing two and more of such gels is highly important in Computational Proteomics.
| Neuron Morphometrics
Semi-automated processing of cultured neuron images.